I've only found two problems:
drives often get stuck in processing machine. after the processing is done, you just can't move the data from the machine back to the drive and the only solution is saving and loading.
when you quit a computer or a console the character jumps a little for some reason.
other than that, the game is amazing and I love it. can't wait for new updates. only thing I ask for: please add quick load, it's a pain to wait for the game to go to the menu and then load the save every time you die.