Okay. I know this is a repolished season one with extra content. And it was nice to go through it again. Didn't mind the extra scenes either.
One thing that bothers me though? Why merge the first three episodes? It was FINE as it was. Even if the first three episodes are shorter. Your episode 2 title "X vs. G 2" no longer makes sense because you no longer have an "X vs. G." Furthermore, you still say that "Episode V has ended" after going through "Scout Squabble." I know you wanted the episodes to be the same length, but that's gonna throw off longtime viewers (like me) who are used to seeing five episodes of your Visual Novel, not three.
If there's anything you should change about this it's definitely this! That and you have missing backgrounds when you try to go through the archives...and...I can't find those comics that everyone was talking about.