Yeah I agree with the others, the scene with Komoli being all "I want to imprison you and run experiments on you like a lab rat forever, your mother never agreed with me with my unethical experiments. Also side note I tried to ruin Macsen's graduation out of... spite for knowing Killigan? The academy is doing HORRIBLE things even deeper down." get resolved with "Oh maybe you can just run experiments and torture the gigantic monster instead of me, also hire binini!" and Komoli being all "Yeah I thought keeping you down in the depths would protect you like your mother wanted, but now I see the error in my ways" feels like two old scripts accidentally mashed together haha.
Though Killigan could be playing it smart since he has absolutely no power there (considering Binini's comment that the academy has more horrible experiments, the rest could have Komoli's back if he accused her of kidnapping and forced experimentation). Keeping Komoli and the rest cool just to find a way to get as far away from her as possible might be the best option. Though Killigan doesn't seem like the type to think that way. It's a hard plot to resolve to be sure.