I could have sworn I had more saves in 6.9. Is it possible to transfer the files over? I still have the previous version intact in it's own directory.
Saves should be shared in the appdata folder on Windows, or in the home/.renpy folder for Linux/Mac. But yeah 0.6.2 save files are compatible with 0.6.91, so feel free to transfer files from any of the saves folder :)
Thanks!