It will have an effect, but no one knows what.
Currently, there’s no difference.
The game kinda tries to steer you to the “correct option” but at the end of the day it’s your choice.
Thanks
Just to Confirm it Spoiler!
The Correct option is Destroying it right?,the Puppet does metion later on that it was a trap.
Maybe?
Like I said, the game keeps trying to steer you to pick that option, but it could be a red herring for all we know.
Only info I managed to squeeze from Arc is that he’s considering giving the player an option to “fix their mistakes” later on… Whatever that may mean.