game verstion 0.4.1 according to redme or 0.4.41d according to the web page...Choosing elf, dark elf or taurus and then adding one to the bonus stat does not increase it, also elf seems to be starting with one in str as well as magic
This issue is still present as of 0.4.42c
Selecting races that have a bonus point in a specific stat do not gain a point in the stat the first time you add to it.
As far as having extra points, that's random at generation.