I have some bad news and some good news, the bad news is that after being knocked out cold and murdered by one of the local creatures, that when I went into the tavern to rest, the bug struck harder than ever before, leaving my stats flicking, and not being able to do any actions. I do believe that is the first time it struck while I was just resting, and I know for certain that it was the first time my stats stared flickering. Also while paying a priest for a blessing it struck once more. The good news being that a tree falling over did not trigger this bug where before it almost certainly triggered the bug, and looking at the console I've figured out that a certain error message always appears in the console when the bug strikes:
_tkinter.TclError: badlistbox index "": must be active, anchor, end, @x,y, or a number