Hey, friend!
Thank you very much for your kind comments!
I've fixed the traits shuffling around with today's update (0.3.13), have you had a chance to download it?
I think there's no fixing the mod you've already created, but what you could do is create the mod again (just the distribution of the traits) and then dropping the previous mod's images as they are in the new mod's folder. Sorry that there's no better way to fix it, but that feature is definitely coming down the road alongside a bunch of other modding capabilities!
Also, I'm stoked to hear you are liking the game! Please let me know if you find any other issues so I can fix them right away!