Hey Chiel, I have the same settings, and I have tried opening and closing the game. It appears to be doing its own thing since I am definitely reading text I've already seen with no skip option. I'm going to try the ctrl option. Will this appropriately stop at unread text and selections?
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Yes! If you skip by pressing the CTRL button, the game will still stop at choices & new sentences as long as you tick "Seen messages". When you stop pressing CTRL, it will also stop skipping!
The difference with the Skip Button is: If you clicked it (The skip button under the textbox), the game will continue to skip after you make a choice! You need to click the button once more to stop skipping!