Hi Cory,
I am sorry to here that Animshed does not work for you as you would like.
There are two options in Animshed to stop all the sprites shifting when you are re arranging them, however this way of working might not suit everyone. This is just how AGK accepts the sprites. You have to re arrange them in order. Animshed is designed to make this arrangement easier by dragging your sprites into their positions as opposed to typing in columns and rows etc. or manually typing in your code where they are in the sprite sheet.
Thank you for bringing this to my attention and the process ( and how to improve uppon it ) will be looked into in future updates.
Fuzzy Visions aims to satisfy all their users and help them have an enjoyable creative time with Animshed.
Please let me know if you require a full refund.
Have a great day Cory.
Kind Regards,
David Holyoake